Nos publications

Les publications listées ci-dessous présentent des exemples d’applications qui ont été réalisées par ViroScan3D.

High Pathogenicity of Nipah Virus from Pteropus lylei Fruit Bats, Cambodia.
Gaudino M, Aurine N, Dumont C, Fouret J, Ferren M, Mathieu C, Reynard O, Volchkov VE, Legras-Lachuer C, Georges-Courbot MC, Horvat B..Emerg Infect Dis.
2020 Jan;26(1):104-113. doi: 10.3201/eid2601.191284.

Vaccines inducing immunity to Lassa virus glycoprotein and nucleoprotein protect macaques after a single shot.
Mateo M, Reynard S, Carnec X, Journeaux A, Baillet N, Schaeffer J, Picard C, Legras-Lachuer C, Allan R, Perthame E, Hillion KH, Pietrosemoli N, Dillies MA, Barrot L, Vallve A, Barron S, Fellmann L, Gaillard JC, Armengaud J, Carbonnelle C, Raoul H, Tangy F, Baize S.Sci Transl Med.
2019 Oct 2;11(512). pii: eaaw3163. doi: 10.1126/scitranslmed.aaw3163.

Characterization of cellular transcriptomic signatures induced by different respiratory viruses in human reconstituted airway epithelia.
Nicolas de Lamballerie C, Pizzorno A, Dubois J, Julien T, Padey B, Bouveret M, Traversier A, Legras-Lachuer C, Lina B, Boivin G, Terrier O, Rosa-Calatrava
M.Sci Rep.
2019 Aug 7;9(1):11493. doi: 10.1038/s41598-019-48013-7.

Repurposing of Drugs as Novel Influenza Inhibitors From Clinical Gene Expression Infection Signatures.
Pizzorno A, Terrier O, Nicolas de Lamballerie C, Julien T, Padey B, Traversier A, Roche M, Hamelin ME, Rhéaume C, Croze S, Escuret V, Poissy J, Lina B, Legras-Lachuer C, Textoris J, Boivin G, Rosa-Calatrava M. Front Immunol.
2019 Jan 29;10:60. doi: 10.3389/fimmu.2019.00060. eCollection 2019.

Environmental Variations in Mycobacterium ulcerans Transcriptome: Absence of Mycolactone Expression in Suboptimal Environments.
Sanhueza D, Guégan JF, Jordan H, Chevillon C.Toxins (Basel).
2019 Mar 4;11(3). pii: E146. doi: 10.3390/toxins11030146.

Pathological, and Molecular Factors of Aggressiveness in Lactotroph Tumours.Neuroendocrinology.
Trouillas J, Delgrange E, Wierinckx A, Vasiljevic A, Jouanneau E, Burman P, Raverot G.Clinical, 2019;109(1):70-76. doi: 10.1159/000499382. Epub 2019 Apr 3. Review.

Exome sequencing identifies germline variants in DIS3 in familial multiple myeloma. Leukemia.
Pertesi M, Vallée M, Wei X, Revuelta MV, Galia P, Demangel D, Oliver J, Foll M, Chen S, Perrial E, Garderet L, Corre J, Leleu X, Boyle EM, Decaux O, Rodon P, Kolb B, Slama B, Mineur P, Voog E, Le Bris C, Fontan J, Maigre M, Beaumont M, Azais I, Sobol H, Vignon M, Royer B, Perrot A, et al.
2019 Sep;33(9):2324-2330. doi: 10.1038/s41375-019-0452-6. Epub 2019 Apr 9. No abstract available.

Investigation of potential pathogenicity of Willaertia magna by investigating the transfer of bacteria pathogenicity genes into its genome.
Hasni I1,2, Chelkha N1, Baptiste E1, Mameri MR2, Lachuer J3,4,5, Plasson F2, Colson P1, La Scola B6 Investigation of potential pathogenicity of Willaertia magna by investigating the transfer of bacteria pathogenicity genes into its genome Sci Rep.
2019 Dec 4;9(1):18318. doi: 10.1038/s41598-019-54580-6.(genome de novo, trancriptome de novo, NGS Illumina)

Dynamic Transcriptional Analysis Reveals IL-6 Axis as a Prominent Mediator of Surgical Acute Response in Non-ischemic Mouse Heart.
Badawi S, Paccalet A, Harhous Z, Pillot B, Augeul L, Van Coppenolle F, Lachuer J, Kurdi M, Crola Da Silva C, Ovize M, Bidaux G. A
2019 Oct 31;10:1370. doi: 10.3389/fphys.2019.01370. eCollection 2019 (mRNAseq, Illumina)

Repurposing of Drugs as Novel Influenza Inhibitors From Clinical Gene Expression Infection Signatures.
Pizzorno A, Terrier O, Nicolas de Lamballerie C, Julien T, Padey B, Traversier A, Roche M, Hamelin ME, Rhéaume C, Croze S, Escuret V, Poissy J, Lina B, Legras-Lachuer C, Textoris J, Boivin G, Rosa-Calatrava M
2019 Jan 29;10:60. doi: 10.3389/fimmu.2019.00060. eCollection 2019.

Characterization of cellular transcriptomic signatures induced by different respiratory viruses in human reconstituted airway epithelia.
Nicolas de Lamballerie C, Pizzorno A, Dubois J, Julien T, Padey B, Bouveret M, Traversier A, Legras-Lachuer C, Lina B, Boivin G, Terrier O, Rosa-Calatrava M.Sci Rep.
2019 Aug 7;9(1):11493. doi: 10.1038/s41598-019-48013-7.

Non-Pathogenic Mopeia Virus Induces More Robust Activation of Plasmacytoid Dendritic Cells than Lassa Virus.
Schaeffer J1,2, Reynard S3,4, Carnec X5,6, Pietrosemoli N7, Dillies MA8, Baize S9,10.
2019 Mar 21;11(3). pii: E287. doi: 10.3390/v11030287.

Impact of equine assisted reproductive technologies (standard embryo transfer or intracytoplasmic sperm injection (ICSI) with in vitro culture and embryo transfer) on placenta and foal morphometry and placental gene expression.
Valenzuela OA, Couturier-Tarrade A, Choi YH, Aubrière MC, Ritthaler J, Chavatte-Palmer P, Hinrichs K. Reprod Fertil Dev.
2018 Jan;30(2):371-379. doi: 10.1071/RD16536. PMID: 28735601 (RT-PCR

UNC-120/SRF independently controls muscle aging and lifespan in Caenorhabditis elegans. Aging Cell.
Mergoud Dit Lamarche A, Molin L, Pierson L, Mariol MC, Bessereau JL, Gieseler K, Solari F
2018 Apr;17(2). doi: 10.1111/acel.12713. Epub 2018 Jan 3 (affymetrix microarray)

Stem Cell-Like Properties of CK2p-down Regulated Mammary Cells
M Burute, B Mograbi, L Guyon, M Théry – The Epithelial-to …, 2018 – books.google.com
Xia Wu Hadi Kabalane Malik Kahli Nataliya Petryk Bastien LaperrousazYan Jaszczyszyn Guenola Drillon Frank-Emmanuel Nicolini Gaëlle Perot Aude Robert

Hyrien Developmental and cancer-associated plasticity of DNA replication preferentially targets GC-poor, lowly expressed and late-replicating regions Nucleic Acids Research
Cédric Fund Frédéric Chibon Ruohong Xia Joëlle Wiels Françoise ArgoulVéronique Maguer-Satta Alain Arneodo Benjamin Audit Olivier
Volume 46, Issue 19, 02 November 2018, Pages 10157–10172 (mRNAseq, Illumina)

Mitochondrial damage and cytoskeleton reorganization in human dermal fibroblasts exposed to artificial visible light similar to screen-emitted light.J Dermatol Sci.
Rascalou A, Lamartine J, Poydenot P, Demarne F, Bechetoille N
2018 May 5. pii: S0923-1811(18)30213-5. doi: 10.1016/j.jdermsci.2018.04.018. [Epub ahead of print] (microarray illumine, transcriptome)

SMAD6 overexpression leads to accelerated myogenic differentiation of LMNA mutated cells.
Janin A, Bauer D, Ratti F, Valla C, Bertrand A, Christin E, Chopin E, Streichenberger N, Bonne G, Gache V, Cohen T, Méjat A.
Sci Rep. 2018 Apr 4;8(1):5618. doi: 10.1038/s41598-018-23918—x (transcriptome, Illumina beadchip)

Esophageal cancer cells resistant to T-DM1 display alterations in cell adhesion and the prostaglandin pathway.
Sauveur J, Matera EL, Chettab K, Valet P, Guitton J, Savina A, Dumontet C..Oncotarget.
2018 Apr 20;9(30):21141-21155. doi: 10.18632/oncotarget.24975. eCollection 2018 Apr 20.

Profiling Immune Escape in Hodgkin’s and Diffuse large B-Cell Lymphomas Using the Transcriptome and Immunostaining.Cancers (Basel).
Péricart S, Tosolini M, Gravelle P, Rossi C, Traverse-Glehen A, Amara N, Franchet C, Martin E, Bezombes C, Laurent G, Brousset P, Fournié JJ, Laurent C.
2018 Oct 31;10(11). pii: E415. doi: 10.3390/cancers10110415.(transcriptome microarray affymetrix)